PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05663.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ZF-HD
Protein Properties Length: 279aa    MW: 30841.6 Da    PI: 10.2206
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05663.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer96.42.3e-30101150357
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                   v+Y+eCl+NhAas+Ggh+vDGCgEfmps     +++a+kCaACgCHR+FHR++ 
    Dr05663.1 101 PVKYRECLRNHAASIGGHVVDGCGEFMPS-----ETDAMKCAACGCHRSFHRKDD 150
                  589*************************9.....4689***************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEFRNPDDHI TTATTTTTAT TTMTFNQTSQ IRTSAFSKPT LSPSSSLILS PRTNFLSSSS  60
TRNNNNNNNN GNCFELPHTS SPPPPPPPPP LQVPILASTS PVKYRECLRN HAASIGGHVV  120
DGCGEFMPSE TDAMKCAACG CHRSFHRKDD YRLSNGGSRR RGRSSSHVPL LLPPPLAPNP  180
HLGSSATESS SEELNAPAQT HSAAVQQPKK RFRTKFTAEQ KEKMLAFSER VGWRIQRQDE  240
AIVEQFCAEA GVKRQVLKVW MHNNKNTVKK QLQQPQQQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.15e-55ZF-HD family protein