PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr05605.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | C2H2 | ||||||||
Protein Properties | Length: 136aa MW: 15681.9 Da PI: 8.1205 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.2 | 6.4e-05 | 83 | 105 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H Dr05605.1 83 CSyeGCGKTFIDAGALRKHAHIH 105 77779**************9877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
MELNSSHPTY DRRSALRNRA PPVRWFKEWS AFRRRTDLAA TGGKCSLLKW VTEDTLKALK 60 EKTMEAEQRD LEPEPTTEVL FLCSYEGCGK TFIDAGALRK HAHIHGERQY ICTYEGCGRV 120 TSVLSQSCFL IYEIIY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 7e-41 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr05605.1 |