PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05343.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 302aa MW: 33752.8 Da PI: 6.6612

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05343.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.7	1.1e-32	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+a+e+LGG++kAtPk +l+lm+v gLt++hvkSHLQ+YR+ Dr05343.1 19 PRLRWTPDLHHCFVQAIEKLGGQDKATPKLVLQLMDVRGLTISHVKSHLQMYRS 72 8****************************************************7 PP
2	Myb_DNA-binding	49	1.4e-15	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+a+++lGg t+k++ + m g+t ++ks++q+y+ Dr05343.1 20 RLRWTPDLHHCFVQAIEKLGGQdkaTPKLVLQLMDvRGLTISHVKSHLQMYR 71 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MGSCGRNGAV RQYVRSKVPR LRWTPDLHHC FVQAIEKLGG QDKATPKLVL QLMDVRGLTI 60 SHVKSHLQMY RSMRNDMNRL ELQTSQNKDN DTAGDEQHDG NSNPNNTITT TTTNSSNSVS 120 PSPPCSKAAT AAAAAEAMEL EFHHYQFMYP SSPPPLKSQG ICETVLSQYC FDDYMQAIAM 180 ESGIKHCLRM QKDAVQTGFL PADYHLSNLL NPMQYMREEE SNNTFKMIRR SGYEDYNQWS 240 ERKKRVRVEE VEEECSLSLT LSWPPNSSSH VLLSSWSGCS DGCSGYGGAS VNLELSMSVC 300 GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	1e-32	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr05343.1