PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr05302.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | bHLH | ||||||||
Protein Properties | Length: 240aa MW: 26740.1 Da PI: 6.0153 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.6 | 2.9e-05 | 152 | 189 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ +L++l+ + +K + a++L ++eYIksL Dr05302.1 152 RKEKLGDRITTLQQLVSPF-----GKTDTASVLLDTIEYIKSL 189 77888999********998.....8*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MGERDMYESK WMAENQRIAS PSNITTVAQD LSSYEPVATA SSSSLLELDA LSMNWRREIP 60 RSNDHLANWF PSPNPMHALK QGQIKSELFL ISSKHQLSSQ TDEASSQSLE SIVNNQLLSS 120 NEAQSQKPSP ESSSIASQQK RTVSTISTLK VRKEKLGDRI TTLQQLVSPF GKTDTASVLL 180 DTIEYIKSLH DQVNVSTVCS IFKDGWYIFL LNSLLLHSAA PPFSLWNTYC LTALTVLDPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G05170.1 | 1e-19 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr05302.1 |