PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05186.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 297aa    MW: 33326.2 Da    PI: 6.8879
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05186.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.18.5e-29121182159
                ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                ldDg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs++dp++++++Y+geH ++
  Dr05186.1 121 LDDGHSWRKYGQKDILGAKYPRAYYRCTHRitqGCLATKQVQRSDSDPSIFDVIYRGEHSCS 182
                59***************************9999**************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEKITGTGIA PLYYERLVDV LAKGEVEARQ LKAHLNEQQP SFEFCKASLE SIHFALNEAM  60
SIAKVSMPEN CLPSVWLNSS SSLDSPSSDS SDHKDMPKKR KSQPKWSNKV RVNPGTMDAP  120
LDDGHSWRKY GQKDILGAKY PRAYYRCTHR ITQGCLATKQ VQRSDSDPSI FDVIYRGEHS  180
CSKKIKQKAA SSSSQENKQD FFSFNTGVKI EGNEHERSSS SVCFPSSQVL TCLSSMDNHF  240
MGNDCFSVSP CIDNHQQANE SELNDIFFTS MTSASNSSVV GIHDFMDYNP FDPKFFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.13e-35WRKY family protein