PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr05059.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | G2-like | ||||||||
Protein Properties | Length: 243aa MW: 27497.1 Da PI: 5.6464 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.7 | 9.9e-32 | 128 | 183 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r+ W+peLH++F++a+eqLGGs++AtPk+i+e+mkv+gLt+++vkSHLQkYRl+ Dr05059.1 128 KARRSWSPELHRKFLHALEQLGGSHVATPKQIREIMKVDGLTNDEVKSHLQKYRLH 183 689***************************************************97 PP | |||||||
2 | Myb_DNA-binding | 42 | 2.2e-13 | 130 | 181 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r +W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ Dr05059.1 130 RRSWSPELHRKFLHALEQLGGShvaTPKQIREIMKvDGLTNDEVKSHLQKYR 181 678*****************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MVPLEEEKTK STMEYIEALE EERRKMEVFH RELPLCVQLV TQAIESIKNG EDCPVKSGEV 60 LPTPVLEEFI PLKPSLSSFD GEDRQRCHET TMEEKPDWLR SVQLWSQEPE PELELEKKEG 120 GQSPTQRKAR RSWSPELHRK FLHALEQLGG SHVATPKQIR EIMKVDGLTN DEVKSHLQKY 180 RLHTKRSAPA VPISGNSSAQ TPHFMVVSGI WVQPIEFAST TLNGTTSSSS QMTTVSPADE 240 PKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13300.1 | 7e-56 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr05059.1 |