PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr05004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | ERF | ||||||||
Protein Properties | Length: 257aa MW: 28830.6 Da PI: 9.5936 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.3 | 1.6e-17 | 111 | 160 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 s++kGVr+++ +g+W+AeIrdp r r++lg+++t+ eAa a+ aa +++ Dr05004.1 111 SKHKGVRYRP-WGKWAAEIRDP----LRgVRVWLGTYDTEHEAALAYQAASRRID 160 79********.**********7....246**********99******99988875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MPGPQRQLVN QNRMRRKWGK SPDPKLRARP ESERQLRKLS VVFSDPDATD SSSDEDEPEY 60 ETRKKAKRVL REIPILPSLA IGPISFKPRK TLTASRAKNG KLLPSSSIGS SKHKGVRYRP 120 WGKWAAEIRD PLRGVRVWLG TYDTEHEAAL AYQAASRRID AEKRAAAAAA TVSGSSYQQP 180 NPNLFSVPSP ASVLDVFADA DSRMLTEFFV REDPLMTLPG FGLQPESPFW EHISSVSDLT 240 GLDFADLDEW MDFSFDI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 6 | 16 | RQLVNQNRMRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72360.1 | 3e-19 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr05004.1 |