PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr04812.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 716aa MW: 77685.9 Da PI: 5.8649

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr04812.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.7e-32	304	361	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g H h+k Dr04812.1 304 DDGYNWRKYGQKQVKGSEYPRSYYKCTHQNCPVKKKVERSH-EGHITEIIYKGAHSHPK 361 8**************************************.*************85 PP
2	WRKY	103.2	1.4e-32	515	573	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+++d k v++tYeg+Hnh+ Dr04812.1 515 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHD 573 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 716 aa Download sequence
MAGMDDNVSV IGDWTPLNPS PRTLMPDFLN DGFSPRPFPD NLAGNGNVEP ARKPENRDGV 60 DTAFQFSNVI SLDSGMFDAS KPAPRSGLAE RMASRAGFSA PKIDMAGIKS ATMDSSTTEV 120 RSPYLTIPAG LSPTTLLDSP VFLSNMAQPS PTTGKLLFEQ YNGVNMASGV TDKVKQHTLE 180 DTSESFAFKP HLDTSSSFFS TADNKNALAF NHQQALPSID ISVHTERQVR GGNVEAVAIA 240 FQNQHDFNLQ TGFSDSSDRR NPADNAMFNQ KVCDEQSPPL DDQQDEEADP KSEFSSVTVG 300 APADDGYNWR KYGQKQVKGS EYPRSYYKCT HQNCPVKKKV ERSHEGHITE IIYKGAHSHP 360 KPAPNRRSGI VPSQSYTEMP QDGSENPGAQ ANLDGKHMWN NSQSGHEWRS DGLDATSSAS 420 MPVEIGDPAA SLQAQHGARF ESQDVAIDVS STLSNDEEDD GATHGSVSLG GDGEGDETES 480 KRRKVDSSVI EMSAASRAVR EPRVVVQTTS EVDILDDGYR WRKYGQKVVK GNPNPRSYYK 540 CTNPGCTVRK HVERASHDLK SVITTYEGKH NHDVPAARGS GHSNSGPSPA VGVTTSQPQG 600 LHRRPELIQA QDSLMRFNSP QLAAFGPPGN FGFTMGQQGL NNLSISSLSM VASMKMPVLP 660 PVHPYMACQQ PTDPGFMIPK GEPKEEPMSE STLPLPNGSS SVYHQIINRL PLGPQL

Sequence ? help Back to Top

Protein Sequence Length: 716 aa Download sequence

MAGMDDNVSV IGDWTPLNPS PRTLMPDFLN DGFSPRPFPD NLAGNGNVEP ARKPENRDGV  60
DTAFQFSNVI SLDSGMFDAS KPAPRSGLAE RMASRAGFSA PKIDMAGIKS ATMDSSTTEV  120
RSPYLTIPAG LSPTTLLDSP VFLSNMAQPS PTTGKLLFEQ YNGVNMASGV TDKVKQHTLE  180
DTSESFAFKP HLDTSSSFFS TADNKNALAF NHQQALPSID ISVHTERQVR GGNVEAVAIA  240
FQNQHDFNLQ TGFSDSSDRR NPADNAMFNQ KVCDEQSPPL DDQQDEEADP KSEFSSVTVG  300
APADDGYNWR KYGQKQVKGS EYPRSYYKCT HQNCPVKKKV ERSHEGHITE IIYKGAHSHP  360
KPAPNRRSGI VPSQSYTEMP QDGSENPGAQ ANLDGKHMWN NSQSGHEWRS DGLDATSSAS  420
MPVEIGDPAA SLQAQHGARF ESQDVAIDVS STLSNDEEDD GATHGSVSLG GDGEGDETES  480
KRRKVDSSVI EMSAASRAVR EPRVVVQTTS EVDILDDGYR WRKYGQKVVK GNPNPRSYYK  540
CTNPGCTVRK HVERASHDLK SVITTYEGKH NHDVPAARGS GHSNSGPSPA VGVTTSQPQG  600
LHRRPELIQA QDSLMRFNSP QLAAFGPPGN FGFTMGQQGL NNLSISSLSM VASMKMPVLP  660
PVHPYMACQQ PTDPGFMIPK GEPKEEPMSE STLPLPNGSS SVYHQIINRL PLGPQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-168	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr04812.1