PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr04331.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB_related

Protein Properties

Length: 206aa MW: 23394.1 Da PI: 8.4774

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr04331.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.2	1.1e-14	16	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 rg+W++eEd +l ++ +++G W ++++ g gRt++++k++w+++l Dr04331.1 16 RGAWSEEEDSRLRRCLEKYGAIKWCDVPSKAGrlPGRTANDIKNHWNTHL 65 89*********************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MEKCLAKDGK PLALRRGAWS EEEDSRLRRC LEKYGAIKWC DVPSKAGRLP GRTANDIKNH 60 WNTHLSKKSI AKEKLWNPKT IAKGTPSIKP REKKGEFKII KPQPWTIPVN WSWLKDQPVH 120 RGHLQDKSGI NSTDLXPSSG NNNVSREESK TILPEKLDNI FLGIDDMTXG EAQTNFEVGY 180 IGGIGDEQFF QQEDAEWAAF LLDMDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66390.1	5e-17	MYB family protein

Link Out ? help Back to Top
Ensembl	Dr04331.1