PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr03664.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 448aa MW: 48548.4 Da PI: 6.6254

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr03664.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.3	1.8e-05	340	377	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A++YIk L Dr03664.1 340 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIDYIKFL 377 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MADDFHVCNE NWWSVARSSS AGFDGPTGMS SVASSISCSS TISHISGGGG YSWAPAEVVE 60 GSTRSAGDEP VGSGSGSTVS YQDSHKVQAS DQVPPCVSFM DSSLQVPGFG LSSPMIDWNQ 120 ALIGSGRVEP SFHAMLQEDL SSRXVFRQGI PMESAQVQGQ GSTGGSSANL FKEMNQGLIL 180 LEQQHQEQGQ GGNFPLVPTS YGYNSVAQGL YEQENKSQLQ QQSLFQSPMV FQHTDLPQFL 240 KSXSPKHHAL SNQLHFSNNT PYWNASGGTA GVDVRPSICA SLPSHFVQQA FEQKPNCNNN 300 LSIKKNSEAV TSGTRKSNSE PAFKKPRMET PSPLPTFKVR KEKLGDRITA LQQLVSPFGK 360 TDTASVLHEA IDYIKFLHEQ VGVLSTPYLK NGNLVQHQQN NEKHKDGEGS KQDLRSRGLC 420 LVPISSTFPV ASETPADFWT PTFGGMYR

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MADDFHVCNE NWWSVARSSS AGFDGPTGMS SVASSISCSS TISHISGGGG YSWAPAEVVE  60
GSTRSAGDEP VGSGSGSTVS YQDSHKVQAS DQVPPCVSFM DSSLQVPGFG LSSPMIDWNQ  120
ALIGSGRVEP SFHAMLQEDL SSRXVFRQGI PMESAQVQGQ GSTGGSSANL FKEMNQGLIL  180
LEQQHQEQGQ GGNFPLVPTS YGYNSVAQGL YEQENKSQLQ QQSLFQSPMV FQHTDLPQFL  240
KSXSPKHHAL SNQLHFSNNT PYWNASGGTA GVDVRPSICA SLPSHFVQQA FEQKPNCNNN  300
LSIKKNSEAV TSGTRKSNSE PAFKKPRMET PSPLPTFKVR KEKLGDRITA LQQLVSPFGK  360
TDTASVLHEA IDYIKFLHEQ VGVLSTPYLK NGNLVQHQQN NEKHKDGEGS KQDLRSRGLC  420
LVPISSTFPV ASETPADFWT PTFGGMYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	3e-59	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr03664.1