PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr03538.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 27794.8 Da PI: 5.7639 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.7 | 3.1e-11 | 142 | 189 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka++L + ++YI+ Lq Dr03538.1 142 SHSLAERARREKISERMKILQDLVPGC----NKVIGKASVLDEIINYIQALQ 189 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDPVAMASQG VAGEMWQYGM LGGARIGGRD VASVGDSTVT EQSTGGGGGG RSRRKWTDIT 60 AAGSEGDSSK LVSSSSGNEL ADCEGKRIKI MKSIEDNSNS RSEAEASSGN CNKSVDQNGQ 120 PSEPSKQDYI HVRARRGQAT DSHSLAERAR REKISERMKI LQDLVPGCNK VIGKASVLDE 180 IINYIQALQH QVEFLSMKLE AVTSRVNSGM EGFTLKDFGA QPFGTAPSLA FGSQAREFEQ 240 EPTSEWLHMQ VGGAFERVT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 6e-67 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr03538.1 |