PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr03478.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | YABBY | ||||||||
Protein Properties | Length: 174aa MW: 19261.8 Da PI: 8.4944 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 204.9 | 3e-63 | 2 | 148 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnve.keesastsvssek 100 + + ++e+vCyv+Cn+CntilavsvP + +f++vtvrCGhC++ll+vn+ q l+ + + ++++++ + k++ +s+s+ + Dr03478.1 2 SAQLAPENVCYVHCNYCNTILAVSVPGNNVFNIVTVRCGHCSNLLAVNIGALLQSLPPPNL---------Q------GNQMEVGSSsKSNRTSASN---S 83 567789**********************************************999998873.........2......2222222220222222222...3 PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++++++ +p irPPekrqrvPsaynrfikeeiqrik+ nPdishreafsaaaknWahfP+ihfgl Dr03478.1 84 VESDQQQMLP-----IRPPEKRQRVPSAYNRFIKEEIQRIKSMNPDISHREAFSAAAKNWAHFPHIHFGL 148 3456666666.....9****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MSAQLAPENV CYVHCNYCNT ILAVSVPGNN VFNIVTVRCG HCSNLLAVNI GALLQSLPPP 60 NLQGNQMEVG SSSKSNRTSA SNSVESDQQQ MLPIRPPEKR QRVPSAYNRF IKEEIQRIKS 120 MNPDISHREA FSAAAKNWAH FPHIHFGLTL DANKQAKLDE PISAQGSQKS QEFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 2e-67 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr03478.1 |