PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03425.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 363aa    MW: 40827.3 Da    PI: 10.2839
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03425.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.83.4e-31297354359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp+++++tYegeH h+
  Dr03425.1 297 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEGEHSHN 354
                9************************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MEGVEEIHRA AIESSQRVLG LLSHSDEQLQ CRNLLAETGE AVSKFKKMVS MLGNTVGHAR  60
FRRLKESQSS VDNRKILSDN PVIPKPEPSS TSTPPQLLPS TVLDSSSMIP QHVPKTIFLE  120
NPVLEMDLIN KSRIQLGSEA PSNQFQFLQQ QQQQQNSQRF QLQQQQQQQQ QQQQQQQLRF  180
QADMYRRSNS GINLKFDSSS CAPSMSSARS FASSLSMDRS VASLDGKPFH LIGGSQMSDP  240
VNLRATHKKR CSGRGEDGSG KCATTGRCHC LKRRKLRVKR SIKVPAISNK LADIPPDEYS  300
WRKYGQKPIK GSPHPRGYYK CSSMRGCPAR KHVERCLEDP SMLIVTYEGE HSHNRLMSQS  360
AHT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28650.12e-78WRKY family protein