PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03244.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 309aa    MW: 33211.6 Da    PI: 10.3887
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03244.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.31.2e-31234291359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeH+h+
  Dr03244.1 234 DEYSWRKYGQKPIKGSPYPRGYYKCSSVrGCPARKHVERAPDDPSMLIVTYEGEHRHS 291
                9*************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAVDLIARSK MENQIAIQEA AAAGLRGLEH LVLQLSHQSH QQTTIDCREI TDHTISKFKK  60
VISILNRTGH ARFRRGPSSV TQTLTLSSPL PPAPPPLPPP PSQTLTFDFT NPAAGSRGTD  120
IATSQFTNDS FSISTPMSSA NSSFLSSITG DGSVSNGKQG SSLLLGSIPS LSAGGKPPLS  180
SGYKKKCHAH SGDDFSGKPS SGGRCHCSKR RKSRVKRTIR VPAISSKMAD IPPDEYSWRK  240
YGQKPIKGSP YPRGYYKCSS VRGCPARKHV ERAPDDPSML IVTYEGEHRH SPAVAAGGEP  300
IIFQAPREI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.12e-90WRKY family protein