PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02792.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 299aa MW: 32995.7 Da PI: 5.3746

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02792.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	68.3	2.1e-21	4	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lp+G+rFhP+ el+ eyL kv+g + + + +ik+ d y + P L + + + e+ +++ F++ + + ++ r +r t +g Wka ++ +++++g Dr02792.1 4 LPRGCRFHPSGFELI-EYLSDKVSGCEDPGQGFIKDDvDAYASSPDLLFAkfCPDDEDGRLFCFTPIKFRITHHFRCRR-TPDGHWKAIHATQMIKDRNG 101 799**********.*******99988877644******7412333344478999999888877777777.799************* PP NAM 98 elvglkktLvfykgra.pkgektdWvmheyrl 128 +lvg + Lv+ +gr+ g++t+W+m+ey+l Dr02792.1 102 NLVGRMQKLVYCHGRTwLFGRRTNWTMKEYTL 133 ********99762579********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MGRLPRGCRF HPSGFELIEY LSDKVSGCED PGQGFIKDDV DAYASSPDLL FAKFCPDDED 60 GRLFCFTPIK FRITHHFRCR RTPDGHWKAI HATQMIKDRN GNLVGRMQKL VYCHGRTWLF 120 GRRTNWTMKE YTLHTNPPQN VALCEIYSSL KKPNKESDGS LKPIQNQSSL SYSASSKDDV 180 SNFASSQGSP SIHGVSISNS SGVGACSGSV NIDGTGGAGF WSLDEVLSSF SGDDLLSEAE 240 LYLPDNWCPD GGGTDIFKFE DTAGSSNWPE FFPEKVNSPK LDTELCNSDI DGTKPDSKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46590.1	8e-14	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr02792.1