PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr02308.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB | ||||||||
Protein Properties | Length: 283aa MW: 31541.3 Da PI: 8.0521 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.3 | 3e-17 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++q+G+g+W++++ g+ R+ k+c++rw +yl Dr02308.1 15 KGPWTPEEDIILVSYIQQHGPGNWRLVPINTGLMRCSKSCRLRWTNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.3 | 2.1e-14 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E+ ++v++ +lG++ W++Ia++++ Rt++++k++w+++l Dr02308.1 68 RGNFTYTEEAIIVHLQSLLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 113 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MMGRPPCCDK VGIKKGPWTP EEDIILVSYI QQHGPGNWRL VPINTGLMRC SKSCRLRWTN 60 YLRPGIKRGN FTYTEEAIIV HLQSLLGNRW AAIASYLPQR TDNDIKNYWN THLKKKLRRF 120 QASVDCYMNS TSSGSSSTTS HELLSGGYQN PRHHQIPSAY ASSTENISRL LQGWVMKSKI 180 TQEDEVQSII TSDSYKASSS SFAPPVLSNE ELESLIPLGN GSSSSSNNNN INNDNNNNNN 240 NGGCIGAWEK SQCTVDNQNP PLFMLEKWLL DESGVPADAA PLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08810.1 | 4e-85 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr02308.1 |