PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01431.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TALE

Protein Properties

Length: 608aa MW: 67515 Da PI: 7.0042

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01431.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.3	6e-09	530	568	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e++ LA k gLt +qV++WF N R + Dr01431.1 530 MFQNflHPYPKDNEKQLLAIKSGLTRSQVSNWFINARVR 568 5887779******************************88 PP
2	BELL	70.6	2.8e-23	401	471	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++e + kk+ L+++l++Vd+rY+q+ +q++ vis+F +++ ++++t+lAl+ i+ +++L+ +i++qi Dr01431.1 401 QHESNXKKSELVTMLQMVDHRYSQCSDQIRGVISAFCDATESHYSQLHTRLALQMITSFYKNLRHRIMNQI 471 78999****************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MENDMFNAYL PMASHNHMVI DPGSTNLFPD QFVQSGLLDP NSQRQIMANN PSFSSAQEEA 60 MNNLYITSNG GINAYSSVSR NVSHPGDVFS ASTGNTDFRE NLVAANLSAT SLAKLLSAST 120 GFKNHTDAAS INAPLAPLNG MGTAISSDSC ETRKSSLTET VNCVFGQQDA QCLLLARKDA 180 QDQAPSGKTM STVRPSYHVT GNSESGWPLN KALLNFDQSY SYYTANNELS LSLGSCRSPM 240 ISMPSAPDQS SEVSCSGITQ VTSKDSRQAD LSELQDSSHI FRSSFQDVGL GMGLGSAQVL 300 PNNVGFSLFS SSSGPVHFPR VLLGSKYLLV THDIFAEIAC YALENYSEMD DSRGGTEGEV 360 KTSFSSSCSS VRRVPGTGSD DFPHTYQEIK SKSHSDLPFQ QHESNXKKSE LVTMLQMVDH 420 RYSQCSDQIR GVISAFCDAT ESHYSQLHTR LALQMITSFY KNLRHRIMNQ ILLMSQQSGN 480 QCPSDKEKTF ESSFIQRQWA LQHLRRNDQQ SWRPQRGLPE KSVSVLRAWM FQNFLHPYPK 540 DNEKQLLAIK SGLTRSQVSN WFINARVRLW KPMIEEMYSE LNRKNRDESG GDRRGHGNII 600 NLRMQNMS

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MENDMFNAYL PMASHNHMVI DPGSTNLFPD QFVQSGLLDP NSQRQIMANN PSFSSAQEEA  60
MNNLYITSNG GINAYSSVSR NVSHPGDVFS ASTGNTDFRE NLVAANLSAT SLAKLLSAST  120
GFKNHTDAAS INAPLAPLNG MGTAISSDSC ETRKSSLTET VNCVFGQQDA QCLLLARKDA  180
QDQAPSGKTM STVRPSYHVT GNSESGWPLN KALLNFDQSY SYYTANNELS LSLGSCRSPM  240
ISMPSAPDQS SEVSCSGITQ VTSKDSRQAD LSELQDSSHI FRSSFQDVGL GMGLGSAQVL  300
PNNVGFSLFS SSSGPVHFPR VLLGSKYLLV THDIFAEIAC YALENYSEMD DSRGGTEGEV  360
KTSFSSSCSS VRRVPGTGSD DFPHTYQEIK SKSHSDLPFQ QHESNXKKSE LVTMLQMVDH  420
RYSQCSDQIR GVISAFCDAT ESHYSQLHTR LALQMITSFY KNLRHRIMNQ ILLMSQQSGN  480
QCPSDKEKTF ESSFIQRQWA LQHLRRNDQQ SWRPQRGLPE KSVSVLRAWM FQNFLHPYPK  540
DNEKQLLAIK SGLTRSQVSN WFINARVRLW KPMIEEMYSE LNRKNRDESG GDRRGHGNII  600
NLRMQNMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-77	TALE family protein

Link Out ? help Back to Top
Ensembl	Dr01431.1