PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01382.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 349aa    MW: 37725.6 Da    PI: 7.5988
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01382.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.53e-13106150347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar +   Rt+ q+ s+ qky
        Dr01382.1 106 PWTEEEHRMFLVGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKY 150
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MTRRCSHCGT NGHNSRTCPG RTGGGGGGVK LFGVRITEGV APMKKSFSMG CLSSATSAVA  60
TGASPNQAGP SSPDQLRDHA SGYASDDPTH ASCSSNCRSE RKKGIPWTEE EHRMFLVGLQ  120
KLGKGDWRGI ARNFVVSRTP TQVASHAQKY FIRQTNATKR KRRSSLFDMV PEMPMDELPV  180
QEEFMLSSTN EPHENPTKLP SAHNCLDEQS EHKETFENPP VEAQENIPYS TLPLPIPVVP  240
FYSPFVPVPL PFWPPPTMVN PMKSNGVAET HEVLKPTPVL PKEPINVDEV VGMSKLSIGE  300
TSATGMEPSA LSLELLGSSS SSRQSAFHIN PSIGSPDLSQ SKTNAIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.16e-73MYB_related family protein