PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01381.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family B3
Protein Properties Length: 265aa    MW: 29960.5 Da    PI: 9.4342
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01381.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3407.2e-13149611100
                HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
         B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                 + + l++p  f+++++ +++++ t+    + g+ W vk+  +  +++ ++++GW e v+a +L+eg ++vF+++g++ f  ++kvf+ks
  Dr01381.1  14 QQGCKLSIPLAFVKHISDDNHGKATIF---SLGKFWHVKI--QADGEELFFGDGWDELVSALELNEGFSLVFRYEGNMVF--TIKVFDKS 96 
                45699********88877766766666...789*******..99999*********************************..99999985 PP
2B353.83.6e-17169262199
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                f k+  + ++l  + l++p +f++++g +  +s+t++l+d++g++++v l+     ++  ++kGW+ F  +++L egD++ F+ld++++  ++v++ +k
  Dr01381.1 169 FSKTI-TRSNLIYSYLSVPLSFCSSNGFS--TSQTVILTDSEGKTFTVHLS--CPTRSPKFGKGWSVFSGEKNLXEGDTCXFELDSENKNIMHVQITKK 262
                44555.455555556***********988..5679***************4..44445679************************99888899998766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MDGAQRPQFF KVLQQGCKLS IPLAFVKHIS DDNHGKATIF SLGKFWHVKI QADGEELFFG  60
DGWDELVSAL ELNEGFSLVF RYEGNMVFTI KVFDKSGCRQ FNXLKKRKLI SPADDTSTEI  120
NAMKNDVRSI NIEKSKLPGN IQRMELKKKN SHISRFSAPF IDIKKEVQFS KTITRSNLIY  180
SYLSVPLSFC SSNGFSTSQT VILTDSEGKT FTVHLSCPTR SPKFGKGWSV FSGEKNLXEG  240
DTCXFELDSE NKNIMHVQIT KKQSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.19e-15B3 family protein