PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01321.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 254aa MW: 28778.4 Da PI: 6.9066

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01321.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.4e-30	64	121	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY+ eHnh+ Dr01321.1 64 DTWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPSMLVVTYSAEHNHP 121 99**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MHQQKTLNSH HLSTTMDTRH TTQKEQKSKK SIRKVIQKRV VSVPISEGDG IRSRIGGDGA 60 PSFDTWAWRK YGQKPIKGSP YPRGYYRCSS SKGCPARKQV ERSRVDPSML VVTYSAEHNH 120 PWPLPKHQHQ HDHRKQEQKT NKQFPPLMPK VEEEVKKAEE IVDQEEDKLV ELIEGESSLW 180 LPEMLTSHAG VYDPVCSIAT DMAGLSPEEW ERFGGGASKG GSLEEEEELM YADLGELPEC 240 SMVFSRSSFL ECTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29280.1	1e-40	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr01321.1