PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr00117.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TALE

Protein Properties

Length: 361aa MW: 41642.8 Da PI: 8.7755

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr00117.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.3	3.6e-10	213	245	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +e+ LAk++gLt rqV++WF N R + Dr00117.1 213 HPYPKVSEKNMLAKQTGLTRRQVTNWFINARVR 245 79*****************************88 PP
2	BELL	97.2	1.4e-31	77	148	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qelq kka L+ + +eV++rY+qy +q+q++i Feavag+gsak YtslA ++iS++FrcL dai++qi Dr00117.1 77 EKQELQLKKATLVRMFHEVKERYRQYLHQMQALIFTFEAVAGVGSAKTYTSLAXHTISKQFRCLCDAISDQI 148 689********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MFAKDRDCMR LLKFSLMATT HIQSSVLMGS KYFKAAQELL DEVVNFSNGV KEAKKVITKK 60 KXNREEDKDG DELTIEEKQE LQLKKATLVR MFHEVKERYR QYLHQMQALI FTFEAVAGVG 120 SAKTYTSLAX HTISKQFRCL CDAISDQIQE ISKCLGEEDH FGPRLWVVNX QLXPQGVPQH 180 VVMIKNNAWK PQRGLPERAV AILRSWLMEN FLHPYPKVSE KNMLAKQTGL TRRQVTNWFI 240 NARVRLWKPM VEEMYLEETK NEEQSINSNG NSATRTDHSX YQLXSVTSLX SLQQNTVPGL 300 MDVESYYSYP FVGGFAATTD VSLSLGLQHF EQIPQPSYYF ISNDYLSFKN NMNMQNGRSF 360 S

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MFAKDRDCMR LLKFSLMATT HIQSSVLMGS KYFKAAQELL DEVVNFSNGV KEAKKVITKK  60
KXNREEDKDG DELTIEEKQE LQLKKATLVR MFHEVKERYR QYLHQMQALI FTFEAVAGVG  120
SAKTYTSLAX HTISKQFRCL CDAISDQIQE ISKCLGEEDH FGPRLWVVNX QLXPQGVPQH  180
VVMIKNNAWK PQRGLPERAV AILRSWLMEN FLHPYPKVSE KNMLAKQTGL TRRQVTNWFI  240
NARVRLWKPM VEEMYLEETK NEEQSINSNG NSATRTDHSX YQLXSVTSLX SLQQNTVPGL  300
MDVESYYSYP FVGGFAATTD VSLSLGLQHF EQIPQPSYYF ISNDYLSFKN NMNMQNGRSF  360
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	2e-77	TALE family protein

Link Out ? help Back to Top
Ensembl	Dr00117.1