PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr00115.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Dof

Protein Properties

Length: 294aa MW: 32719.4 Da PI: 5.1314

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr00115.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.3	1.7e-38	23	78	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprCds+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ Dr00115.1 23 PNCPRCDSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 78 58***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MLPYTPRPLI MDRRWKPDIE LAPNCPRCDS SNTKFCYYNN YSLTQPRYFC KGCRRYWTKG 60 GSLRNVPVGG GCRKNRRGKS VRTASNLMNN REANHGHRQP QGTLRPDLAL EGMVGNSCNQ 120 TSGLIDMSDI NGGPTIDLSL LYTKYLNQPC QENGNGESVP EFQGEIDEPL NSLMNTSSFV 180 HPMTTDTLSQ NSSEPVSDTL MSNGSCQGLM GELNSSLDQI EYMNSLPFSV DHGVAANEVL 240 SSNCTIAPGF MLQETKYHGL ETFISEDNTA HQENLISGDW STFSQTTFEA FYTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	7e-41	Dof family protein

Link Out ? help Back to Top
Ensembl	Dr00115.1