PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028556887.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | G2-like | ||||||||
Protein Properties | Length: 214aa MW: 24289.7 Da PI: 8.6189 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.9 | 9.7e-08 | 39 | 67 | 21 | 48 |
TT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 21 ggtWktIartmg.kgRtlkqcksrwqkyl 48 g t+k + r mg +g+t +++ks++qky+ XP_028556887.1 39 GATPKGVLRVMGvQGLTIYHVKSHLQKYR 67 458*************************7 PP | |||||||
2 | G2-like | 50.7 | 4e-16 | 40 | 68 | 27 | 55 |
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk +l++m+v+gLt++hvkSHLQkYRl XP_028556887.1 40 ATPKGVLRVMGVQGLTIYHVKSHLQKYRL 68 9***************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MHFPVLLSVF CLLFWSQITC RSYSFDRTNL RNSEICLPGA TPKGVLRVMG VQGLTIYHVK 60 SHLQKYRLAK YLPDSSAEGT KENKESDDVL SKLDNSSGMQ ITEALKLQME VQKRLHEQLE 120 VQRQLQLRIE AQGKYLKKII EEQQRLNGGV PQISADQCTE DKTVPSKSSL KDKSKTNFLH 180 SLSFEDSHHE PHTPETGSPL TSPKHELQVK GQMS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 9e-53 | G2-like family protein |