PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028556269.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB_related | ||||||||
Protein Properties | Length: 89aa MW: 10389.7 Da PI: 6.2619 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.5 | 3.5e-09 | 38 | 79 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++E +l+ + k+ G + W++Ia +++ gRt++++ +w XP_028556269.1 38 PEFSEQEVDLISRMYKLVGEK-WSLIAGRIP-GRTAEEIEKYWK 79 679******************.*********.***********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence |
MNITPILKNI EAQVQELDGV PHHDQKLNEE EKSQSSKPEF SEQEVDLISR MYKLVGEKWS 60 LIAGRIPGRT AEEIEKYWKL KEHRNSSRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01380.1 | 1e-21 | MYB_related family protein |