PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028555091.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 96aa    MW: 10904.3 Da    PI: 8.54
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028555091.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.51e-0719631454
                    HHHHHHHHHHHCTSCCC.......TTS-STCHHHHHHHHHHHHHH CS
             HLH 14 driNsafeeLrellPkas....kapskKlsKaeiLekAveYIksL 54
                    +++N+ +++L++llP+a       p +  + a +L++ + YI+sL
  XP_028555091.1 19 EQMNELISKLQTLLPEARlhtnDRPVTNANAAKVLQEICSYIRSL 63
                    69**************877998888889999************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MSSRRSRSRH SASSRITDEQ MNELISKLQT LLPEARLHTN DRPVTNANAA KVLQEICSYI  60
RSLHREVDNL SERLSELLET TDNNSAQAAI IRSLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.14e-22bHLH family protein