PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028554945.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 151aa MW: 17924.9 Da PI: 6.6773 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 60 | 4.6e-19 | 63 | 120 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +D y+W K Gq ++k + rsY++C ++C+++kkv+ ++p+ ++i Yeg+Hnh+ XP_028554945.1 63 EDDYKWIKCGQQNIKRIQKKRSYFKCVNKNCKARKKVDWPPNEPNNIDISYEGDHNHR 120 79*******************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MKINSDKEEE ANEKNIAEER NDRMMAIQED AYNWRKYGRD WEHYIHNIKM FRNEEQNRVV 60 IPEDDYKWIK CGQQNIKRIQ KKRSYFKCVN KNCKARKKVD WPPNEPNNID ISYEGDHNHR 120 ALATGHSEND EAGIAANEDD LTTLTLGPTR T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23320.1 | 7e-12 | WRKY family protein |