PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028554763.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | B3 | ||||||||
Protein Properties | Length: 250aa MW: 28782.8 Da PI: 10.0546 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.8 | 7.1e-12 | 33 | 98 | 30 | 98 |
..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 30 keesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + +++ t++d+ grsW ++ ++k++ + ++GW +Fvk ++ g f+vFk++g+++f +vkvf+ XP_028554763.1 33 ELNHRAATIRDPLGRSWPANV--EGKGEDlWFCGEGWMNFVKGLDIGIGYFLVFKYKGNMKF--YVKVFD 98 334557999************..88888877889************************9**9..***998 PP | |||||||
2 | B3 | 40.2 | 5.9e-13 | 165 | 245 | 16 | 96 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 l +p f++++ ++ + +++l d++grs v++++rk++ + ++ GW eF+ n+L +gD ++F+ ++++ + v+v XP_028554763.1 165 LNVPLGFLASYRFEN-K-SKVILVDPKGRSSPVRITIRKRRPIiqCCFGMGWHEFCLRNHLSAGDKCIFEIKSEEADAYIVHV 245 778999999995442.3.38***************66555544789999*********************8876666566655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MLLLTTQMAK VAMKKKKVAT RFFKVMLPGY LNELNHRAAT IRDPLGRSWP ANVEGKGEDL 60 WFCGEGWMNF VKGLDIGIGY FLVFKYKGNM KFYVKVFDLT ACEVEYSHEI CSYSKRFELS 120 STLNKQGEAK ASKTAEKLIK QFCKSLGPHF SITLKFCNLR SRPYLNVPLG FLASYRFENK 180 SKVILVDPKG RSSPVRITIR KRRPIIQCCF GMGWHEFCLR NHLSAGDKCI FEIKSEEADA 240 YIVHVHIIRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31640.1 | 6e-18 | B3 family protein |