PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028553677.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 221aa MW: 25274.1 Da PI: 9.3067 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 150.3 | 9.2e-47 | 3 | 159 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..............................kvkaeekewyfFskr 64 l pGfrFhPtdeel+++yL +kv ++++++ +i++v+++k+eP dLp k k+ ++ ke yfF++ XP_028553677.1 3 LSPGFRFHPTDEELITHYLSNKVLNTSFDA-IAIAQVKLNKCEPCDLPsKnlhsssssvsisassiiyililfrlnsersKI-GGGKEFYFFCEL 95 579*************************99.88***************5489*************99999999887764322.367899****** PP NAM 65 dkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ky+tg r+nrat++gyWk+tgkdke+ + ++ l g+kktLvfykgrapkge+t+Wvmheyrle XP_028553677.1 96 GLKYSTGLRRNRATDAGYWKSTGKDKEIRR-ENILLGMKKTLVFYKGRAPKGERTEWVMHEYRLE 159 *****************************9.999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MELSPGFRFH PTDEELITHY LSNKVLNTSF DAIAIAQVKL NKCEPCDLPS KNLHSSSSSV 60 SISASSIIYI LILFRLNSER SKIGGGKEFY FFCELGLKYS TGLRRNRATD AGYWKSTGKD 120 KEIRRENILL GMKKTLVFYK GRAPKGERTE WVMHEYRLED SYDKWILCRV FEKGLPGKEK 180 KAFGLANIEE EMARRVPLPP LMDAQGLERV PPGRSELNFD N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 3e-61 | NAC family protein |