PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028552885.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

VOZ

Protein Properties

Length: 524aa MW: 58798.2 Da PI: 5.8839

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028552885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	353.8	7e-109	194	403	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 ppp+afl+ kcalwdc+rp+qgsew+qdycssfhatla+negl g+ pv+rp+gidlkdg+lfa+l+ak+qgk+vgip+cegaat+kspwna+ + XP_028552885.1 194 PPPAAFLRQKCALWDCPRPTQGSEWCQDYCSSFHATLAFNEGLSGMIPVVRPGGIDLKDGPLFASLTAKAQGKDVGIPQCEGAATTKSPWNAPGM 288 89******************************************************************************************9 PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 + +++l + + +rafesgnrkqrslpdysgrgwhesrkq+m+efgglkrsyymdpqps++fewhl+eyei+++da+alyrle+kl+ XP_028552885.1 289 LYVCVLFL------VDTEIIKRAFESGNRKQRSLPDYSGRGWHESRKQIMEEFGGLKRSYYMDPQPSNHFEWHLFEYEISNCDACALYRLEFKLA 377 99887632......1223458********************************************************************** PP VOZ 191 dekksakgkvskdsladlqkklgrlta 217 d+kks ++k + d l dlq+++g+l+a XP_028552885.1 378 DHKKSCRAKPNVD-LLDLQQQMGKLSA 403 *****9887.67*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MGRGCRSASH QMFKDKAKNR VDDLQGMFSD LQSARRESRA GDVAVLEEQV NQMLREWKAE 60 LNEASPATSF LGNSRVSSDL SSEIRRLLQL GEEEDDATSQ LAELAQANLK PEPVDTPEAL 120 VGSVQGGRSA AFQEELPQND FLSADCQVAA AIDYPQFNMN QDMQNNQYID LHACGQDAVT 180 LLPHFQEMLP MICPPPAAFL RQKCALWDCP RPTQGSEWCQ DYCSSFHATL AFNEGLSGMI 240 PVVRPGGIDL KDGPLFASLT AKAQGKDVGI PQCEGAATTK SPWNAPGMLY VCVLFLVDTE 300 IIKRAFESGN RKQRSLPDYS GRGWHESRKQ IMEEFGGLKR SYYMDPQPSN HFEWHLFEYE 360 ISNCDACALY RLEFKLADHK KSCRAKPNVD LLDLQQQMGK LSAEHFSDKK RHARHLFEYE 420 ISNCDACALY RLEFKLADHK KSCRAKPNVD LLDLQQQMGK LSAEHFSDKK RHAKGRAKAN 480 LDSSECTQKE IGEGAQNDSP IYGPHLPYAY SIDSLNNYYG SDLK

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MGRGCRSASH QMFKDKAKNR VDDLQGMFSD LQSARRESRA GDVAVLEEQV NQMLREWKAE  60
LNEASPATSF LGNSRVSSDL SSEIRRLLQL GEEEDDATSQ LAELAQANLK PEPVDTPEAL  120
VGSVQGGRSA AFQEELPQND FLSADCQVAA AIDYPQFNMN QDMQNNQYID LHACGQDAVT  180
LLPHFQEMLP MICPPPAAFL RQKCALWDCP RPTQGSEWCQ DYCSSFHATL AFNEGLSGMI  240
PVVRPGGIDL KDGPLFASLT AKAQGKDVGI PQCEGAATTK SPWNAPGMLY VCVLFLVDTE  300
IIKRAFESGN RKQRSLPDYS GRGWHESRKQ IMEEFGGLKR SYYMDPQPSN HFEWHLFEYE  360
ISNCDACALY RLEFKLADHK KSCRAKPNVD LLDLQQQMGK LSAEHFSDKK RHARHLFEYE  420
ISNCDACALY RLEFKLADHK KSCRAKPNVD LLDLQQQMGK LSAEHFSDKK RHAKGRAKAN  480
LDSSECTQKE IGEGAQNDSP IYGPHLPYAY SIDSLNNYYG SDLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-158	VOZ family protein