PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028552051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 303aa MW: 33115.9 Da PI: 5.6456 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.7 | 4.2e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++ G g+W + ++ g+ R++k+c++rw +yl XP_028552051.1 14 KGPWTPEEDKILVDYIQSNGHGSWCSLPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.1e-16 | 67 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++ G+++W+tIa+ ++ gRt++++k++w+++l XP_028552051.1 67 RGPFTQEEQKSIIQLHGIVGNNRWSTIAAQLP-GRTDNEIKNYWNTHL 113 89******************************.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MGRAPCCAKQ GLKKGPWTPE EDKILVDYIQ SNGHGSWCSL PKLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF TQEEQKSIIQ LHGIVGNNRW STIAAQLPGR TDNEIKNYWN THLKKRLLRM 120 GINPDTYAPA SPSSSAAAAS ASFPATRHMA QWESARLEAE ARLSRESILF SSTSSAPADS 180 EPADDSLTAG KPETDFFLRI WNSEVGDAFR KPLPTLHSAA EQVVDDATAP TAESKCCASA 240 GVEVPSGHDS SSSNEVDETS DETYQLYLNL AGDELGLFHG QMGSFSLFST DLNDVVFLDT 300 AFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 3e-98 | MYB family protein |