PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028551654.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 280aa MW: 32508.6 Da PI: 5.8811 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174.3 | 3.5e-54 | 7 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee++++yL +k+++++++ +i e+ +++ePwdLp k+k +ekewyfF+++d+ky+tg r+nrat++gyWkatgkdk++++ XP_028551654.1 7 LPPGFRFHPTDEEIITHYLFQKIADRNFKS-IAIGEASFNESEPWDLPGKAKMGEKEWYFFCQKDRKYPTGMRTNRATATGYWKATGKDKKIFKG 100 79*************************999.88***************99999****************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg +vg+kktLvfy+gra +g+kt+Wvmheyrle XP_028551654.1 101 KGVHVGMKKTLVFYRGRALRGQKTNWVMHEYRLE 134 ********************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MDESLFLPPG FRFHPTDEEI ITHYLFQKIA DRNFKSIAIG EASFNESEPW DLPGKAKMGE 60 KEWYFFCQKD RKYPTGMRTN RATATGYWKA TGKDKKIFKG KGVHVGMKKT LVFYRGRALR 120 GQKTNWVMHE YRLEGTQHQY CNLSYYTDEW VVCKVYHKKN SEISTTVESE ERMNPSSSVD 180 DDLSVETNYF PPLTNSLYLK NSSSKFMEDT NEPGNEMIPS MLFELMRPES MVMSYNLPDT 240 GICSERNIEK NIDSFQSHDH DPCAAVQAVD FDGLWDYGLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 5e-86 | NAC family protein |