PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028551375.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | B3 | ||||||||
Protein Properties | Length: 257aa MW: 29275.6 Da PI: 9.4926 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57 | 3.5e-18 | 101 | 188 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v++ +l lp kf+++h + ++++++lede+g++ e +i r+++ l++GW++F+ +++L++gD +vFkl++ s+f +++ XP_028551375.1 101 FVKSMLRSHVSSCFWLGLPTKFCRDHL--PLCETKMILEDEEGEEHEAIYIGRRTG----LSGGWRSFAVDHKLEDGDALVFKLIELSRF--KIH 187 89************************5..457889***************544444....************************987888..555 PP E CS B3 96 v 96 + XP_028551375.1 188 I 188 4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MEASIHAYED IRRKRIEKNL KQLEDLGIAR ISKSLLEVAK RESKQLVVDS GKRRLYYRRS 60 CKSEPIGREY TGRIASYEEK VVALKKAEML LTEVSSNHPS FVKSMLRSHV SSCFWLGLPT 120 KFCRDHLPLC ETKMILEDEE GEEHEAIYIG RRTGLSGGWR SFAVDHKLED GDALVFKLIE 180 LSRFKIHIVK AIVGSTEAKD EKALYEDPCA SIESIKTADS SCESKSSLFA IQVPKNKSED 240 LSRNARKRKQ SKPRPSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58280.1 | 9e-47 | B3 family protein |