PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028550694.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB_related | ||||||||
Protein Properties | Length: 98aa MW: 11335 Da PI: 9.7382 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.1 | 2.4e-09 | 3 | 33 | 13 | 45 |
HHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 13 vdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +d +++G++ W++Ia + gRt++++k++w XP_028550694.1 3 IDMQARFGNK-WARIATFLE-GRTDNDVKNFWS 33 678899****.*********.***********5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence |
MVIDMQARFG NKWARIATFL EGRTDNDVKN FWSTRQKRLA KLLQTPIPVR SPTNQRKATV 60 CSQVPDSEDV LLQNLNSPSI EFIQFTKCYV NGKELDYI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 4e-20 | MYB family protein |