PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028550406.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family SAP
Protein Properties Length: 439aa    MW: 47997.2 Da    PI: 9.1079
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028550406.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP332.86.7e-1027743315362
             SAP  15 gseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvf...........qvcstwravsrsdllwqrltr 98 
                      +e+  gg++s    ++psssr+r+a+ +wpe f+ea+a ++a da+ +  rl aa+a+++ f           qvcs+wra+s s+ lwq ltr
  XP_028550406.1  77 RQEQIVGGESSRRRAGEPSSSRPRSADLIWPEHFVEAVAGRIAEDAALVGRRLDAAPAVVTFFqsrvlknfdalQVCSAWRAISFSEVLWQDLTR 171
                     34556677777789999*****************************************998874444444444469******************* PP

             SAP  99 riWrrtkllr.dtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstf.lpqhr 191
                     r+W+  ++ r   Wree+i  hrta+nfr +r  + +   +p+       + al Cr+la+sd+yla+Gf+dG+vrl++l   + +  + l  hr
  XP_028550406.1 172 RVWSPRHRRRlPSWREEFISLHRTAANFRAGRCLHNHI--HPP------ISPALFCRRLAFSDRYLATGFSDGSVRLYNLPVAALLAVYdLHLHR 258
                     ***9776555279******************9877544..454......2358****************************9998887735779* PP

             SAP 192 drlGrfsravsGivisdsrlvfatldGdihvavidgag...aaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvG 283
                     drlG+fs ++sGi++ +++lvfa+ dGdi va+i  ++   +a arra +G+ v++G+lvdf+G grWwvGl+aG+pG ++++Wd+ete++v+ G
  XP_028550406.1 259 DRLGHFSTSISGIILLRNQLVFASQDGDIGVAAIADDNnfvNAVARRARAGNPVENGTLVDFVGDGRWWVGLFAGAPGWSWRVWDGETEQQVYAG 353
                     **********************************8877677899*************************************************** PP

             SAP 284 GsltdPeavmGWhmltelt.elvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvds 362
                     Gsltd ++v GWhml+++   +v rv v+e  +++ Cts+r+ ++++  +  v++e e rr     +l as+  +vvvd 
  XP_028550406.1 354 GSLTDRDSVAGWHMLADISgPSVARVGVAESGVVIGCTSSRVQTVSVEGEVEVIAEMELRRAAAADALGASDGRVVVVDG 433
                     ******************9679****************************999999****************99999995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MSKAEAGRRA GDVCACEPQK VLLIYTHNHG RRTGGPHKFA FSLELTRTYC SLLLGLMSGS  60
RRRPPLPAGE ENGGGRRQEQ IVGGESSRRR AGEPSSSRPR SADLIWPEHF VEAVAGRIAE  120
DAALVGRRLD AAPAVVTFFQ SRVLKNFDAL QVCSAWRAIS FSEVLWQDLT RRVWSPRHRR  180
RLPSWREEFI SLHRTAANFR AGRCLHNHIH PPISPALFCR RLAFSDRYLA TGFSDGSVRL  240
YNLPVAALLA VYDLHLHRDR LGHFSTSISG IILLRNQLVF ASQDGDIGVA AIADDNNFVN  300
AVARRARAGN PVENGTLVDF VGDGRWWVGL FAGAPGWSWR VWDGETEQQV YAGGSLTDRD  360
SVAGWHMLAD ISGPSVARVG VAESGVVIGC TSSRVQTVSV EGEVEVIAEM ELRRAAAADA  420
LGASDGRVVV VDGGFRGWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.13e-51SAP family protein