PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028550308.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 325aa MW: 35929.7 Da PI: 5.2684 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.8 | 2.6e-10 | 167 | 215 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_028550308.1 167 NSHSLAERVRREKISERMRILQDLVPGC----SKITGKAVMLDEIINYVQSLQ 215 58**************************....899*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MATPCSSMND TQHFLDTDET VLSLLKQSVE IDGSDNASSQ IMMVSAFGLS GGSRISESLC 60 PADFSVEEKQ MERNFMGKKR RTLSECGGFS LQSTIAKCAD AKEQNDVSPD FVKSSTDKDV 120 KKQKSELLPC YNSSKLTTKQ AKEISQDDDD PKEAYIHVRA KRGKATNSHS LAERVRREKI 180 SERMRILQDL VPGCSKITGK AVMLDEIINY VQSLQQQVEF LSMKLAAVNP ELNFDIEQNF 240 SRAARDGTPS VLGLSPVFST PYAHYPGAVQ IPSEMIVAAT ISQLSSIAQI ENMWDEELQN 300 AIQMTLIPPQ PINNSGFHVK DPKVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 2e-56 | bHLH family protein |