PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028549671.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 261aa    MW: 28175.4 Da    PI: 5.7704
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028549671.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.2e-11140187455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka++L + ++YI+ Lq
  XP_028549671.1 140 SHSLAERARREKISERMKILQDLVPGC----NKVIGKASVLDEIINYIQALQ 187
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MPEMWQFPMV GVSSAVRATA AGLGHRDASA GESTVTEQSV GNRSSKKRRD SGPPAAAANA  60
LSEEDSSKFV STSSGGIDLV FNLADSEAKL LKTGKSIDEN VESKVDAEAT SGGNKLDQPS  120
EPPKQDYIHV RARRGQATDS HSLAERARRE KISERMKILQ DLVPGCNKVI GKASVLDEII  180
NYIQALQRQV EFLSMKLEAV DSRINTGLLE GFSSKDFGGQ AYENVSGLAY ASQPSREYVQ  240
QGPATEWLHM QVGGAFERVT N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-74bHLH family protein