PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028549102.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB_related | ||||||||
Protein Properties | Length: 169aa MW: 18766.4 Da PI: 9.6009 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.1 | 1.7e-07 | 19 | 41 | 24 | 47 |
HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47 W++Ia ++ Rt++++k++w+++ XP_028549102.1 19 WSLIAGLLP-ERTDNEIKNYWNTH 41 *********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MNSGGFVRRL TGVSFNHLWS LIAGLLPERT DNEIKNYWNT HIKRKLFSRG IDPQTHHPIT 60 AATAAFLTLP EIFSPVLETA DTSDNKCHSD SCSGGGSPNY VDLNLDLSTN KPPLLKKLVL 120 ARDPQKVKGS LLATDTVNSE VRDGDAMCPA KKRIQHLTPR FYRRSHQCG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 6e-21 | MYB family protein |