PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028547826.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | B3 | ||||||||
Protein Properties | Length: 255aa MW: 29635.3 Da PI: 10.0569 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 50.1 | 5.1e-16 | 29 | 122 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 ff l p +++ + +l+lp++f ++ +++k++++ l +++ +sW+v+l +k +++ ++ ++GWk+ ++a++Lk g f++F ++g + f + XP_028547826.1 29 FFRLLFPDSNFMK-QLRLPRSFGDHVQIEKPNKQIAELINRKAKSWKVNL--NKDPEGffCFTGEGWKKLARAHHLKLGYFLTFDYNGGMLF--N 118 6667766666666.5********88899999999****************..999999867788**********************998888..5 PP EEEE CS B3 94 vkvf 97 +++f XP_028547826.1 119 FRIF 122 6555 PP | |||||||
2 | B3 | 58.8 | 9.7e-19 | 152 | 248 | 3 | 96 |
EE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 + ++s++l++ + +pkk+ + + ++ +++l de+gr+W v+l++ r++ +r+++ +GW eFv+ ngL+ gD +vF+l+ + XP_028547826.1 152 EAVIHSSNLSKPYMNIPKKCK-KLtelskD---GGKGKVVLIDEKGRKWPVRLSHkaeRGSTERFFIYSGWLEFVHGNGLRRGDRCVFELVC-LR 241 56789999***9*******74.55565431...34458***************99887788888*************************985.45 PP E..EEEE CS B3 90 felvvkv 96 fe ++kv XP_028547826.1 242 FESFIKV 248 5555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MSRLKVEKET LSPKIETIDS SSGFVGYSFF RLLFPDSNFM KQLRLPRSFG DHVQIEKPNK 60 QIAELINRKA KSWKVNLNKD PEGFFCFTGE GWKKLARAHH LKLGYFLTFD YNGGMLFNFR 120 IFGLNTTEIQ NYPSQEEKKC NEEDEEKANI FEAVIHSSNL SKPYMNIPKK CKKLTELSKD 180 GGKGKVVLID EKGRKWPVRL SHKAERGSTE RFFIYSGWLE FVHGNGLRRG DRCVFELVCL 240 RFESFIKVRI IRCGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31690.1 | 1e-18 | B3 family protein |