PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028547672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | C2H2 | ||||||||
Protein Properties | Length: 138aa MW: 15386.9 Da PI: 9.9776 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.6 | 2.2e-05 | 28 | 53 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+Cp C k + + + L+ H+r+ H XP_028547672.1 28 YVCPfaGCEKAYIHEYKLNLHLRKeH 53 9***********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MVELRPHEKP NNAAKAPVLN SASSDRPYVC PFAGCEKAYI HEYKLNLHLR KEHPGHNPEE 60 GYKTALMTAA STGSACVGEP KIEQLSIRIP VIIPRSPFFH SACSLLQILF VTLPIVQRAY 120 QKLTSSTRMI GYKKKGKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 3e-17 | C2H2 family protein |