PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020704995.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 340aa MW: 38337.7 Da PI: 7.8908 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.1 | 3.1e-16 | 29 | 74 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+WT+ Ed +l+++v+++G g+W+ + g+ Rt+k+c++rw + XP_020704995.1 29 RGPWTPAEDTILKEYVRKHGAGNWNVLQKNSGLQRTGKSCRLRWVN 74 89******************************************87 PP | |||||||
2 | Myb_DNA-binding | 44.7 | 3.2e-14 | 83 | 126 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ E+ l++ ++ +lG++ W+ Ia++++ gRt++++k++w+++ XP_020704995.1 83 ESFSPYEETLILLLHDELGNR-WAQIAKHLP-GRTDNEIKNYWNTL 126 679999***************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
MRPPLKKERA STAVAGGGAS ATTQQLQKRG PWTPAEDTIL KEYVRKHGAG NWNVLQKNSG 60 LQRTGKSCRL RWVNNFRPNL KKESFSPYEE TLILLLHDEL GNRWAQIAKH LPGRTDNEIK 120 NYWNTLINRR KRAGLPMYRL ENQQHMPLKS QRQEQCIAIS PPALKPSQAI LSSLPSAMPQ 180 LSENQCVSIR QCPNRGNNIS FQLPYFTYPV ENCLGYFDLG PPPYAVTKEL PSSQFSSNFG 240 DEQMPQGSSR LLDDLLHVID LYGIEVIEET LKADIPTLVD LILRETTAPT SLTVLPGWYN 300 HSSGVGEFLN DPMAVITDKE IGLDVQQLEW IPTVAPVEFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32460.2 | 1e-53 | MYB family protein |