PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020703938.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 397aa    MW: 43952.6 Da    PI: 5.1872
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020703938.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY986.1e-31183241259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  XP_020703938.1 183 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 241
                     699************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MCDYFWQRMD QNNQGDLSDI FRNSSSHTSN DSWHPLPEPA GAFAPPSNLF GDPFAEIGDP  60
LLGEFATTNY FNSSETTIVK TNSTGRSDDC GAQKMLLEEE GKSSIFSRML QISPVIPSKM  120
SAEIGPSPLV GTVAGDSSGC LQISSTRVQG IKRRKSQVKK VVCIPAPAAA SGRPSGTGEV  180
VPSDLWAWRK YGQKPIKGSP YPRGYYRCSS SKGCSARKQV ERSRTDPNML VITYTSEHNH  240
PWPTQRNALA GSTRSHPSKS NNSASTSKNS PHNLNQLATN IKEEHKECSS STINLVKEEE  300
AYEMEKALVD PQDHDFDQVF DESTFMMSDS NQPDDFFADL AELESSDPMN LIFPKGFMGD  360
HDHAKLDEER ERNKALDPFN MFDWEGGSSI EETKRGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.12e-72WRKY family protein