PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020703403.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 198aa MW: 22728.9 Da PI: 5.8191 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54 | 2.8e-17 | 67 | 113 | 10 | 56 |
HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 q+++Le+ F ++ + ++++LA+ lgL+ +qV vWFqNrRa++k XP_020703403.2 67 PQVRALEQSFDVENRLEPXRKARLAQDLGLQPCQVAVWFQNRRARWK 113 699*******************************************9 PP | |||||||
2 | HD-ZIP_I/II | 98.4 | 6.7e-32 | 67 | 149 | 9 | 87 |
HD-ZIP_I/II 9 eqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeen....erLekeveeL 87 qv++LE+sF+ e++Lep rK++la++Lglqp qvavWFqnrRAR+ktk lE+ ++aLk++ydal+ + ++L+++v++L XP_020703403.2 67 PQVRALEQSFDVENRLEPXRKARLAQDLGLQPCQVAVWFQNRRARWKTKPLERVFSALKSRYDALRLDFdfdfDSLRSQVAAL 149 59***************************************************************986511115666666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MATKKVEGLE ERFKGDMCQM KSMVEGQISS VEDKVSSVED KVFDLHVMMK KLLENIIQMA 60 ASETKGPQVR ALEQSFDVEN RLEPXRKARL AQDLGLQPCQ VAVWFQNRRA RWKTKPLERV 120 FSALKSRYDA LRLDFDFDFD SLRSQVAALK LGELVPPNWR EIAHGMLAER ALEHILPSEE 180 DFPYIVRVES TITESNGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G40060.1 | 3e-26 | HD-ZIP family protein |