PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020703050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 291aa MW: 32526.7 Da PI: 4.5023 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.5 | 3e-20 | 68 | 121 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ e++ +LAkklgL+ rqV vWFqNrRa++k XP_020703050.1 68 KKRRLTTEQVQLLERSFETENKLEPERKSDLAKKLGLQPRQVAVWFQNRRARWK 121 56689************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 133.2 | 9.7e-43 | 67 | 158 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl++eqv+lLE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+d+++Lk++ydal +++++L k++++Lr+++ XP_020703050.1 67 EKKRRLTTEQVQLLERSFETENKLEPERKSDLAKKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKSSYDALLADHDSLLKDNDRLRSQVV 158 69**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MDSRHLIFDS SSSHAGHMFF LGGSGSQIFR GGRSVLGFDD GANKRRPFFT TADELLEEEY 60 YDEQQSEKKR RLTTEQVQLL ERSFETENKL EPERKSDLAK KLGLQPRQVA VWFQNRRARW 120 KTKQLERDFD RLKSSYDALL ADHDSLLKDN DRLRSQVVSL TEMLQKELAV GGLKGDDDHQ 180 KATLLTEEEQ LSSPLAAAPT QQRSGDDRLS YKSKGNAIED TEGAAALQVD SSGDSYFQES 240 LIEGNAGCYL GAIEGGICSE EDAGSSDDGC SYLPGGMFVE ASGEENWWVW S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 116 | 124 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 3e-69 | HD-ZIP family protein |