PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020701745.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 486aa MW: 55124.8 Da PI: 7.4036

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020701745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.6	5e-09	297	334	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_020701745.1 297 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 334 554459******************************88 PP
2	BELL	103.8	1.2e-33	159	227	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elq++kakL ++leeVd+rYk+y eq+++v+s Fe++ag g+a+ Y lA ka+SrhFrcL+d i++qi XP_020701745.1 159 ELQRRKAKLFTMLEEVDRRYKKYSEQMKAVVSTFEEIAGGGAARTYSMLAWKAMSRHFRCLRDGISGQI 227 89*****************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MSQDSHYLHH HQHHYPFNNI SAINNHSSMN NFEPTAAGNH DPFTLNMPTP NLRGFVPETA 60 PIAWPGENSS MMRPIHTNQV QSLSLSLFNP PQPPSFQISS HHPFQIKSCK YLLPAQELLN 120 EFCSLGVGNN LKTKNSNKLQ DESSASWSQQ ALYAMEPLEL QRRKAKLFTM LEEVDRRYKK 180 YSEQMKAVVS TFEEIAGGGA ARTYSMLAWK AMSRHFRCLR DGISGQIKAI RKAMGEKDGG 240 ITSGLTRGET PRLKVIDQCL RQQKAFQHPS GTMESHPWRP QRGLPERSVS VLRAWLFEHF 300 LHPYPSDVDK HILARQTGLS RSQVSNWFIN ARVRLWKPMV EEMYLEELNE ETKICQSSHA 360 TSMQEGDSNN QHSSNPNLSS SSEPHFDQGR KSGMLGHLHH LDEPHSLTSI ISTVHTHNHP 420 NPNPNLNQNF DNLDVDHFDS YHGQELTLGL QHHEGDAMQF SVLVGEGQSI PYRNLMGAQL 480 LRDLTG

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MSQDSHYLHH HQHHYPFNNI SAINNHSSMN NFEPTAAGNH DPFTLNMPTP NLRGFVPETA  60
PIAWPGENSS MMRPIHTNQV QSLSLSLFNP PQPPSFQISS HHPFQIKSCK YLLPAQELLN  120
EFCSLGVGNN LKTKNSNKLQ DESSASWSQQ ALYAMEPLEL QRRKAKLFTM LEEVDRRYKK  180
YSEQMKAVVS TFEEIAGGGA ARTYSMLAWK AMSRHFRCLR DGISGQIKAI RKAMGEKDGG  240
ITSGLTRGET PRLKVIDQCL RQQKAFQHPS GTMESHPWRP QRGLPERSVS VLRAWLFEHF  300
LHPYPSDVDK HILARQTGLS RSQVSNWFIN ARVRLWKPMV EEMYLEELNE ETKICQSSHA  360
TSMQEGDSNN QHSSNPNLSS SSEPHFDQGR KSGMLGHLHH LDEPHSLTSI ISTVHTHNHP  420
NPNPNLNQNF DNLDVDHFDS YHGQELTLGL QHHEGDAMQF SVLVGEGQSI PYRNLMGAQL  480
LRDLTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	5e-97	TALE family protein