PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020701551.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 316aa MW: 35293.4 Da PI: 5.5578 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+ ++ + g+ R++k+c++rw +yl XP_020701551.1 14 RGLWSPEEDEKLIKYITTHGYGCWSEVPDKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.8e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+++eE++l++ +++ G++ W+ Ia++++ gRt++++k++w+++ XP_020701551.1 67 RGRFSPEEEKLIISLHAVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89********************.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MGHHSCCNQQ KVKRGLWSPE EDEKLIKYIT THGYGCWSEV PDKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF SPEEEKLIIS LHAVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPN 120 TGTSTSSIRQ NSNIQIPPTF TQDFNSLAQF EPLANQVMTN SNPNDNSSIF PSSPIPLFMF 180 ESECGATMGK DDHELVADVG NLNLVDIWST NGNQNDHQAL SPLCSFVDHN YLPPLVDGMV 240 TMGPPPGCIG EDCAASGSHE CFEKNELSEW VEAQQYPGFF IWDQGLQGQI GGEDLPVSSP 300 PKSNTDTSVD TFPSSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63910.1 | 3e-85 | MYB family protein |