PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020700570.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 386aa MW: 43569.3 Da PI: 5.4467

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020700570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.6	2.5e-49	12	139	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 ppGfrFhPtd+el+++yL kkv+++ +i+++d+yk++PwdLp+k+ ++ ew+fFs+r++ky++g r+nra++sgyWkatg+dk++ls++ XP_020700570.1 12 PPGFRFHPTDQELITQYLWKKVTASLPADWAIIADIDLYKYNPWDLPEKALFGQGEWFFFSPRERKYPNGVRPNRAAASGYWKATGTDKPILSAG 106 9*******************9998666688***********87778899**********************************95 PP NAM 97 gel.vglkktLvfykgrapkgektdWvmheyrl 128 g + +g+kk Lvfykgr pkg+ktdWvm+eyrl XP_020700570.1 107 GVQcIGVKKALVFYKGRPPKGTKTDWVMQEYRL 139 5444*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEGEELLSSQ FPPGFRFHPT DQELITQYLW KKVTASLPAD WAIIADIDLY KYNPWDLPEK 60 ALFGQGEWFF FSPRERKYPN GVRPNRAAAS GYWKATGTDK PILSAGGVQC IGVKKALVFY 120 KGRPPKGTKT DWVMQEYRLL DSMAPTQTQK QKSSMRLDDW VLCRVRMKGN SVGENDEMPM 180 ESPNIKSVQE KHMPGKEKSS SNDWGDHLSY LLESPTEGKE ASGEGSSQGF VWSSEHLGCV 240 NYAELDDWVL CRVRMKGNSV GENDEMLMES PNVKSVLEKH MPGKEKSSSN DWGDHLSYLL 300 ESPTEGKEAS GEGSSQGFVW SSEHLGCVNY AEAQQNQSHQ QQHHQQQQQQ QQHSNKQLQC 360 SGDGWFSQNE LGSSDQGCFT NFFSNQ

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEGEELLSSQ FPPGFRFHPT DQELITQYLW KKVTASLPAD WAIIADIDLY KYNPWDLPEK  60
ALFGQGEWFF FSPRERKYPN GVRPNRAAAS GYWKATGTDK PILSAGGVQC IGVKKALVFY  120
KGRPPKGTKT DWVMQEYRLL DSMAPTQTQK QKSSMRLDDW VLCRVRMKGN SVGENDEMPM  180
ESPNIKSVQE KHMPGKEKSS SNDWGDHLSY LLESPTEGKE ASGEGSSQGF VWSSEHLGCV  240
NYAELDDWVL CRVRMKGNSV GENDEMLMES PNVKSVLEKH MPGKEKSSSN DWGDHLSYLL  300
ESPTEGKEAS GEGSSQGFVW SSEHLGCVNY AEAQQNQSHQ QQHHQQQQQQ QQHSNKQLQC  360
SGDGWFSQNE LGSSDQGCFT NFFSNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	4e-73	NAC family protein