PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020700193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | G2-like | ||||||||
Protein Properties | Length: 819aa MW: 91238.3 Da PI: 7.0618 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 37.4 | 5.5e-12 | 30 | 54 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt +LHerFv+av+qLGG+e XP_020700193.1 30 KPRLRWTADLHERFVDAVAQLGGPE 54 79*********************97 PP | |||||||
2 | Myb_DNA-binding | 28 | 5.2e-09 | 32 | 53 | 1 | 22 |
TSSS-HHHHHHHHHHHHHTTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg 22 r+rWT++++e++vdav+qlGg+ XP_020700193.1 32 RLRWTADLHERFVDAVAQLGGP 53 89******************99 PP | |||||||
3 | G2-like | 48.1 | 2.6e-15 | 274 | 304 | 25 | 55 |
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPkti+++m+vkgLtl h+kSHLQkYRl XP_020700193.1 274 TEATPKTIMRTMGVKGLTLFHLKSHLQKYRL 304 57****************************8 PP | |||||||
4 | Myb_DNA-binding | 28.6 | 3.2e-09 | 277 | 303 | 23 | 48 |
-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmg.kgRtlkqcksrwqkyl 48 t+ktI+rtmg kg+tl ++ks++qky+ XP_020700193.1 277 TPKTIMRTMGvKGLTLFHLKSHLQKYR 303 8*************************7 PP | |||||||
5 | G2-like | 104.5 | 6.5e-33 | 533 | 587 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v gLt++hvkSHLQkYRl XP_020700193.1 533 RQRLRWTHELHERFVDAVTQLGGPDRATPKGVLRVMGVSGLTIYHVKSHLQKYRL 587 58****************************************************8 PP | |||||||
6 | Myb_DNA-binding | 60.8 | 3e-19 | 535 | 586 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg g+t +++ks++qky+ XP_020700193.1 535 RLRWTHELHERFVDAVTQLGGPdraTPKGVLRVMGvSGLTIYHVKSHLQKYR 586 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 819 aa Download sequence |
MFPGLIHRQE ASIPQEAIHS PSVVLTADPK PRLRWTADLH ERFVDAVAQL GGPEINGSRR 60 TFPRILTDTR RILPGTSLGP SMPSPNELIR NFLFFAACRW IYTETKPTYE NKRKLVKAPL 120 DFIGMGIFEY GNVEVETHDA TDTKFSKFKD DIEYKPKYSK DEIQISSNGA HFILAIGMAT 180 SQAKMKVDIA MLQTVFPSCD STDQQNRDQV DFFKGSKVVD GKLENAMDEA FQGDENLIAM 240 KIAANSIESS KDVNEKICET REFMSKAEVE VFITEATPKT IMRTMGVKGL TLFHLKSHLQ 300 KYRLGKQSGK EMTEQPKDVP GSSSLSPRVA ASDINENQEV KEALRAQMEV QRRLHEQVEV 360 QLCWLSFVQK HIKIRMEAYQ NYIDSLLEKA CKIASEQIAS GGFNGQVCPP PSSLTKSVFQ 420 QLPLTESSPR FSHFWWPLTC LFVALLLVLR TPNLHCVFKE FVARSICEVR IPGFLGFGFS 480 AFAVDMYQPK HISSLNSVHN NGVAHDQIIE FTGNTMSPNG SANNSSNPNL SSRQRLRWTH 540 ELHERFVDAV TQLGGPDRAT PKGVLRVMGV SGLTIYHVKS HLQKYRLAKY IPDSSSDGLK 600 DESKEPGDLL SGMDSSSGVQ ITEALKLQME VQKRLHEQLE VQRQLQLRIE AQGKYLKKIM 660 EEQQRLNGVL AETPGMNLPP LPTSADFCLD SDPSTPAPIC ESLHKDKTSN GKHGKADSLV 720 KSTSFEDSSR REPLTPDSSF HTSESLKHER PSKRQRSNGS GVRGSGQVDL VLGNHILESS 780 SGSEFQQQCS MFNAGTHFDS SGTSFGDDDQ FGNGSGSDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 4e-72 | G2-like family protein |