PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020700073.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 265aa MW: 30627.3 Da PI: 5.9921 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 81.6 | 7.6e-26 | 140 | 188 | 4 | 52 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +i+l+++++yF++pi++AA e++++lTvLK++CR GI RWPhRk+ksl XP_020700073.1 140 DIELKEIRAYFHMPITKAAMEMNIGLTVLKKRCRDVGITRWPHRKLKSL 188 799********************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 265 aa Download sequence |
MDTDNDDILQ SFMSWPFFED SFIDLSPFTM TDFEDNSLMD FAPPFFNSGS YDLLPLPESL 60 EHKAIPLSCL PSLPDHQKLH CSEEIMKYYT EAMPLSAVTI SPQTLIEENA EGEEIMRKEL 120 KSSRGRRNRG SGKGSMRSCD IELKEIRAYF HMPITKAAME MNIGLTVLKK RCRDVGITRW 180 PHRKLKSLIT LINNIQEIGK SSSDVNIMEE LKSLEEYRKL MEENPEIQLT NETKKLRQAC 240 FKANYKKRLA MHAMFLPAAY SKDFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G53040.1 | 4e-40 | Nin-like family protein |