PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020699985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 261aa MW: 29802.8 Da PI: 9.1374 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.1 | 1.3e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ ++k G g+W++ ++ + R++k+c++rw +yl XP_020699985.1 14 KGAWTKEEDERLIAYIKANGEGCWRSLPKAASLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 60 | 5.1e-19 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T eEdel+++++ +lG++ W++Ia++++ gRt++++k++w+++ XP_020699985.1 67 RGNFTDEEDELIIKLHSLLGNK-WSLIAARLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDERLIAYIK ANGEGCWRSL PKAASLLRCG KSCRLRWINY 60 LRPDLKRGNF TDEEDELIIK LHSLLGNKWS LIAARLPGRT DNEIKNYWNT HIKRKLVNLG 120 IDPATHRPLH EAQQNNSISF FKAGNNKAVE FAKREEGRNK SSSSSSSSSS SNSSEKMLMW 180 RRSEEEKTKW RCPDLNLELS ISPPYEKKED FFDYEVLNRD PLIGLCFSCK LGVKNSSECK 240 CGGVFLGFSR GVLDYRSLET N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 7e-98 | MYB family protein |