PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020699870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 298aa MW: 33583.5 Da PI: 7.1004 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.1 | 4.8e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+Wk+I+ g+ R+ k+c++rw +yl XP_020699870.1 14 KGPWTPEEDIILVSYIQEHGPGNWKAIPTNSGLSRCSKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49 | 1.5e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E+ l++++ ++lG++ W++Ia++++ Rt++++k++w++++ XP_020699870.1 67 RGSFTDQEENLIIHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNTHM 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MGRPPCCDKF GVKKGPWTPE EDIILVSYIQ EHGPGNWKAI PTNSGLSRCS KSCRLRWTNY 60 LRPGIKRGSF TDQEENLIIH LQALLGNRWA AIASYLPERT DNDIKNYWNT HMKKKLRRME 120 NEAVEEGTGF SNYQPIAKGQ WERRLQTDIN MAKQALQEAL SMEKPRFLYE SKPSCSSHSS 180 STPPSSTTYA SSTENISRLL ENWTRKTPKN SSKSTQHSVN NLVNVGTDST TSSDGTITSV 240 PNNNMVSPET GLFQVDSKPS LEERFPLSLI ETWLFDENYG GANTVLDLSL DDASHELF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62470.2 | 2e-96 | MYB family protein |